Documentation

Mechanistic Links Table

Generate structured tables of molecular and biological mechanism links across your selected papers. The Mechanistic Links Table extracts and organises cause-and-effect relationships, pathway connections, and molecular interactions into a clear, citation-grounded format.

What's Generated

The Mechanistic Links Table analyses your selected papers and produces a structured overview of:

  • Molecular interactions: Protein-protein interactions, gene regulation events, and signalling cascades extracted from full-text analysis
  • Pathway connections: How biological pathways connect and influence each other across your selected studies
  • Cause-and-effect chains: Mechanistic relationships from upstream triggers to downstream outcomes
  • Cross-paper synthesis: Connections that span multiple papers, revealing relationships not visible in any single study
Citation Grounding

Every mechanistic link in the table is tied to specific source papers:

  • Each link includes the source PMID(s) that support the connection
  • Evidence type is classified (Direct or Derived) so you can gauge the strength of each connection
  • Links derived from full-text analysis capture mechanistic details that abstract-only tools would miss
Use Cases
  • Pathway mapping: Quickly map the molecular mechanisms underlying a biological process from your literature set
  • Drug target identification: Identify potential intervention points by understanding upstream and downstream relationships
  • Grant proposals: Include structured mechanistic summaries backed by peer-reviewed citations
  • Literature reviews: Synthesise mechanistic knowledge from dozens of papers into a single table

Plan Limits

Mechanistic Links are available on every plan, with monthly allowances that scale by tier: Basic gets a small allowance, Plus expands it, and Pro and Team have the largest allowances. Paid plans include pay-as-you-go if you exceed your monthly allocation.